![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT31197.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 521aa MW: 57541.4 Da PI: 6.8745 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.6 | 9.6e-11 | 240 | 296 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + rk + g ++ +++Aa+a++ a++k++g PHT31197.1 240 SIYRGVTRHRWTGRYEAHLWDnSCR-RegqARKGRQ-GGYDKEDKAARAYDLAALKYWG 296 57*******************4444.2344336655.7799999*************98 PP | |||||||
2 | AP2 | 49.8 | 8.8e-16 | 339 | 390 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g PHT31197.1 339 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 390 57****************988532...5************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 521 aa Download sequence |
MAPDNNNWLS FSLSSMEMLN NSSPTSAHHH HHHQSNNMKL SSNFDLGSSS ADSHQYYFAD 60 NFFPHGWSNQ RLQVMYPDVE KEAMRINING DSSSLFQNFV DSQIHQQVPP KLEDFLGGDS 120 SSLTQDSSSL THMYNYNDPH SHHHQDFKSL TGFQAFSTNS GSEVENSVGT EFGTNESCNE 180 LGYTTCVAPP PPLAPAASTG ALSLAVNATT NHCPEKEKAI VAVVDESCKK ISDTFGQRTS 240 IYRGVTRHRW TGRYEAHLWD NSCRREGQAR KGRQGGYDKE DKAARAYDLA ALKYWGPTAT 300 TNFPVANYAN EVEEMKHMTK QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV 360 AGNKDLYLGT FATEEEAAEA YDIAAIKFRG VNAVTNFEMN RYDVEAIMKS SLPVGGTAKR 420 LKLSLESEQK SSPSNQQLTQ CNSSSSNTSS SNNINFGAVP PVSAIPCGVP FDTATPAYYH 480 HNFFPYLHPG NAGVPDTSGA VTAMPLLSSA ADLYIWPHQS Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G10510.2 | 1e-133 | AP2 family protein |