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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT30512.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | AP2 | ||||||||
Protein Properties | Length: 433aa MW: 48628.4 Da PI: 6.0894 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.7 | 5.2e-17 | 153 | 202 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PHT30512.1 153 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 202 78*******************......55************************997 PP | |||||||
2 | AP2 | 43.2 | 9.8e-14 | 245 | 295 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g PHT30512.1 245 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKCNG 295 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 433 aa Download sequence |
MWNLNDSPDQ IMEDELEEGY HSPIDEKGKR VGSVSNSSSS TVLVVDNGNS EEEEGERGKK 60 KGSTPSKIFG FSVSKDNLSS DSELPVVTRQ FFPVENESEM GDESTIFPRA QWAEIKFYTS 120 ESPLGTGSVA NPTEVSQQQP IKKSRRGPRS RSSQYRGVTF YRRTGRWESH IWDCGKQVYL 180 GGFDTAHAAA RAYDRAAIKF RGVAADINFN LEDYEEDLKQ MSNLTKEEFV HVLRRQSTGF 240 PRGSSKYRGV TLHKCGRWEA RMGQFLGKKY VYLGLFDTEV EAARAYDKAA IKCNGKDAVT 300 NFDRSIYENE PNSSECTDNA DHNLDLSLGG SSSKKGGRET GENRDQNSSL QLDARWGHQG 360 SRPNKLPSQM GFDGQRREGY NETETLQLSD LTHLNSLGTL QPNINEVQRF GQYGEAHMVQ 420 AYPRQFSSYQ VSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-114 | AP2 family protein |