PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027087210.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family AP2
Protein Properties Length: 432aa    MW: 47012.5 Da    PI: 8.6726
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027087210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.9e-1791150155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV++++++gr++A+++d  ++n+   k+ k+++lg ++ +e Aa+a++ a++k++g
  XP_027087210.1  91 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 150
                     57*******************766644468557*************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MASSSSRPPP GKVETGGCSS GGGGGGGGET SEAVVAAATC AVMVGPIPGG GGAGDELAMY  60
RGLKKAKKER GCTAKERISK MPPCTAGKRS SIYRGVTRHR WTGRYEAHLW DKSTWNQNQN  120
KKGKQVYLGA YDDEEAAARA YDLAALKYWG PGTLINFPVT DYTRDLEEMQ NFSREDYLAS  180
LRRKSSGFSR GVSKYRPLSS RWDPQFGAAD DATAENEYIG GFCIDRKFDL TTYIKWWGTN  240
KPRQVDPHAK SSEETSYRPG EDMSSELKSV ELTAKPTEPY EMPRLGVPQE GKHRKGAVSA  300
MSILSQSTAF KSLQEKGLKK KAIDENDENE DKNVINKKDY GKGVEKCSHD GGNERVGAGL  360
GMTGGLPVPR NVYPLTPLLT APLVTNYNSI DSLNDPVLWT SLVSVLPVGS SRTSEVAKNE  420
SSSEYNLFQQ EG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.11e-138AP2 family protein