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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027087014.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | AP2 | ||||||||
Protein Properties | Length: 491aa MW: 54095.6 Da PI: 6.7379 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.6 | 5.5e-17 | 167 | 216 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_027087014.1 167 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 216 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 491 aa Download sequence |
MLDLNLSVVN DEETGIFEEG MGEYESAEET SDSSVVNAEA AEASSNATTV DDDTCSARAG 60 ANSSSDLLTF NFDILKVNGA NRGEEVEGED ENQVVFGGRM TAAHQPDFVT KNLFPVAELG 120 PGRAPDRARS NAGNWADLSF SHQQKQPPQQ QQQQVKKSRR GPRSRSSQYR GVTFYRRTGR 180 WESHIWDCGK QVYLGGFDTA HAAARAYDRA AIKFRGIDAD INFTICDYEE DMKQMKNLTK 240 EEFVHILRRQ STGFSRGSSK YRGVTLHKCG RWEARMGQFL GKKAYDKAAI KCNGREAVTN 300 FEPSTYEPEM PSNMVQPHSQ NEGSHHDLDL NLGISTSSGK ENGSSRDVHY HPYDVQKARI 360 SKIDISSTTV NSPPLKGLPL TPERPQLWTG VYSNSMPNYK ERVIENRFEV GSSQGPQKWA 420 WQMQSQLSAT PVTVFSTAAS SGFSSSASNA SSPSSKAPNS SAVGLCFASY PVSSANNSQC 480 RFQLGPQWPP T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.1 | 3e-96 | AP2 family protein |