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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.0367s0009.4.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | AP2 | ||||||||
Protein Properties | Length: 2109aa MW: 224905 Da PI: 9.3929 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 34.2 | 6.1e-11 | 226 | 275 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+w +g+W+A+I+ + +lg+f + +Aa a+++a+++ +g Bobra.0367s0009.4.p 226 SIYRGVSWSTCTGKWRAQIWKG-----NDVSHLGYFEDEVKAAIAYDEAALANKG 275 57****************9994.....68889******99**********99876 PP | |||||||
2 | AP2 | 35.3 | 2.9e-11 | 560 | 609 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s++kGV+w+k +++W A+I+ + k lg+f+ e+Aa+a++a ++k +g Bobra.0367s0009.4.p 560 SKFKGVSWHKHSQKWYAYIQA------SgKMRGLGYFDDQEDAARAYDAEARKVHG 609 79****************999......449999*******************9998 PP | |||||||
3 | AP2 | 35.4 | 2.6e-11 | 716 | 767 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ykGV+w+k r W ++I++p +++++ g+f+ + eAa+a+++ ++ +g Bobra.0367s0009.4.p 716 AYKGVSWHKHRRMWQVYIHVPQG--ASRSYHHGYFDDEIEAARAYDREVLRVRG 767 69*******9999*******932..4599999*****99*******98887776 PP | |||||||
4 | AP2 | 22.4 | 3.1e-07 | 1190 | 1235 | 1 | 51 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaark 51 s ++GV+w k++++W+AeI + +f + e+Aa++ ++a + Bobra.0367s0009.4.p 1190 SSFRGVTWSKQTHKWRAEIEIdG-----CVQFLGSSANE-EDAARMVDRALL 1235 679***************99944.....89988666666.******999875 PP | |||||||
5 | AP2 | 24.5 | 6.7e-08 | 1323 | 1364 | 1 | 47 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaai 47 s+y+GV+w++k ++W++ ++d k+ lg+f + +Aa+a + Bobra.0367s0009.4.p 1323 SKYRGVSWCEKGKKWRSLLWD------GaKQRFLGHFANEVDAARAFD 1364 89*******************......44**********88***9976 PP | |||||||
6 | AP2 | 40.7 | 6.1e-13 | 1680 | 1729 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s++kGV+w ++++W+A+++ g +k ++g++ ++e+Aa+a++ a ++l+g Bobra.0367s0009.4.p 1680 SRFKGVSWSDSSNKWRAQCWN----G-SKVQYIGYYESEEDAARAYDTAILQLRG 1729 789***************666....4.7*************************98 PP | |||||||
7 | AP2 | 36.7 | 1.1e-11 | 1779 | 1828 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+ykGV+w +++++W+A++++ +k +lg ++ + eAaka+++a +l+g Bobra.0367s0009.4.p 1779 SKYKGVSWSERSHKWRAQLWHD-----NKVRHLGFYDDEVEAAKAYDRAVVELRG 1828 89*****************994.....5999*******99**********99998 PP | |||||||
8 | AP2 | 48.4 | 2.4e-15 | 1885 | 1934 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GVrw++++ +W+A+I d +k++slg+++t+e Aaka++ +++l+g Bobra.0367s0009.4.p 1885 SPYRGVRWHERNTKWEARIFDG-----QKQISLGYYDTEEAAAKAYDVRALRLRG 1934 68****************9994.....6***********************9998 PP | |||||||
9 | AP2 | 23.4 | 1.5e-07 | 2025 | 2074 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++d + +W A+ + + g +lg f+++ eAa+a+++ + +++g Bobra.0367s0009.4.p 2025 SLYRGVSYDTGTCKWWAH---FAN-G-AHIRQLGAFDSEVEAAQAHDQEAIRMHG 2074 57****************...843.2.48889******99*************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 2109 aa Download sequence |
METLGADVGA SVKVPVPAPT TPVQPGALPD MGTQVLVSPG LPSTPLPGGP PLPKWPVALS 60 ETPETLKEPG MSKTLQLQYD SPSFVNLPGN APAPMSSTQQ QRGSCTPEVA PEGPQVSHSP 120 SSGMEHTESP GNSHRARPGI LWRESTRKWE AHGFANGRLE LLGCFDTEEA AQQYARHALG 180 YAGGGAMISP PKKPIPRLPG GPLLTVSSSG PRKASRKKGP HSHNSSIYRG VSWSTCTGKW 240 RAQIWKGNDV SHLGYFEDEV KAAIAYDEAA LANKGPGAIT NFCPSSYGYP KPDPTQSKRK 300 QKSGVKRRSP SSNPPFASES SPAPGAFIGG SSAGHPQKPS EDMELEILQG QSRGWGATKS 360 RSHSEETNPQ LAGRLPPTPL GDVTEVSPHV ARRKRTCSRK PSLAGLASHL VHEPAAEEAA 420 EALASMSSGD GETLSPRSSD PEGISGTAGI EEAPIPRLSR LISPFTKRLN SPSSCKESPA 480 GSSPKTGQEP DALLGGRRRS TRISDAHDAF AASLLTGLAC KGDAEPSSRA SPAISEGGGS 540 SRKRGSVGRG TASESAAKSS KFKGVSWHKH SQKWYAYIQA SGKMRGLGYF DDQEDAARAY 600 DAEARKVHGA KAVVNFDLEG NRILRECPSR GRSLPSSAVN SEDMASADES NPGDTPRSRH 660 RPTSLPWGPA PSGVPSRMPG SRPNSSGAAT SVGSEEDPSA WGTRRPPYKK PAAHSAYKGV 720 SWHKHRRMWQ VYIHVPQGAS RSYHHGYFDD EIEAARAYDR EVLRVRGPTT PTNFPLSDYI 780 NADGTFINPA HASSSGKGEA RSRPGSSGKA ASPPPPRGAK GASRRQHADS HFEPIEKPDA 840 LYMLMNAAMS LDAPARESDE ESWREEPPLK KRWRRSGTPR PPAPDQRGRV LGSSQDAGLI 900 HRSASPHSIG PCSATRSSTP PPSQQNRLGS SGQILWSPTG AAVTPLIAQA VDLFTSNSPK 960 PVPHTPATAV EIPPRRHPPI KPPPLAEDAH SKGSFPEFAA LMHAAKVFPL SVDERQPMEL 1020 DQQGSQGGDP MGADGTMAVQ QPRDNDAAAA LAPTPRNDGA EDPGSTEGPQ EKETEHMDVD 1080 PQVQNSTAGL TQSGRGHTDV PEIEVSLPGQ AKISSYYRSV GSPAWKWDTQ GPGRAAARTD 1140 AGSHPRSIRR GSPSWTVSRG LGAVSEASPL GTQSHPEGES CETGEGKRVS SFRGVTWSKQ 1200 THKWRAEIEI DGCVQFLGSS ANEEDAARMV DRALLQHPAY PGRLNHPPAE FQMPLWMKLG 1260 TGLSPDDTRV QGAGEALGGP PNVKVEPSSG LKDPMDINEG TPKASTPKSG KQPRSPHSPR 1320 GTSKYRGVSW CEKGKKWRSL LWDGAKQRFL GHFANEVDAA RAFDRNSIML KGKDAAKLNF 1380 PISDYNLEEL AAQFASAPQG PPEAFHPSAE ISQSQSKQTS ASNKQPPVEG PREPQDVATQ 1440 GTEQERTAQA PKAQAPVFRE QLMTPVVPPA SPANPFGEQL RREQMHGESP GVPGVGGTLL 1500 LANTLLSRLD NASRASPLIN PATCIPSPQE IETPVQRPRH FAAGGDGLEA QGSLTPLGDP 1560 NREPQLYCMT PEAQGPPDAG TWRPSRSCSE ASPHEEPGAL KEAPDAEPSQ ATLAQVMPSP 1620 LEAPQGLVHG SSAPHLGPSL GRQAPKQVGK RSRTPDPSST VHGPEGRDRV WWPGPGKRSS 1680 RFKGVSWSDS SNKWRAQCWN GSKVQYIGYY ESEEDAARAY DTAILQLRGP LMQTNFPATN 1740 YESRTNADGQ GEGEVENPQG HIGGTGSPGG RSGIQRGTSK YKGVSWSERS HKWRAQLWHD 1800 NKVRHLGFYD DEVEAAKAYD RAVVELRGTS AQTNFPIAGA GGARPLISHA TVTPSQSAGG 1860 TPVPTTEGPI SPPRVRGSPN AKGSSPYRGV RWHERNTKWE ARIFDGQKQI SLGYYDTEEA 1920 AAKAYDVRAL RLRGPNTQVN FPQSPVAEPA PPHMHGSDGP GDSARRRRSL SFTPDSPVHT 1980 PPGPGVLGPA DSTSPSGWGV RKPRSGVPGL PPRSPIDSSR APRVSLYRGV SYDTGTCKWW 2040 AHFANGAHIR QLGAFDSEVE AAQAHDQEAI RMHGSRAVTN FPHPEVQAIK QPLFGSPVPH 2100 SGAPPAGQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 4e-21 | AP2 family protein |