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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.0367s0009.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | AP2 | ||||||||
Protein Properties | Length: 2133aa MW: 227446 Da PI: 9.2116 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 34.2 | 6.2e-11 | 250 | 299 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+w +g+W+A+I+ + +lg+f + +Aa a+++a+++ +g Bobra.0367s0009.1.p 250 SIYRGVSWSTCTGKWRAQIWKG-----NDVSHLGYFEDEVKAAIAYDEAALANKG 299 57****************9994.....68889******99**********99876 PP | |||||||
2 | AP2 | 35.3 | 2.9e-11 | 584 | 633 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s++kGV+w+k +++W A+I+ + k lg+f+ e+Aa+a++a ++k +g Bobra.0367s0009.1.p 584 SKFKGVSWHKHSQKWYAYIQA------SgKMRGLGYFDDQEDAARAYDAEARKVHG 633 79****************999......449999*******************9998 PP | |||||||
3 | AP2 | 35.4 | 2.6e-11 | 740 | 791 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ykGV+w+k r W ++I++p +++++ g+f+ + eAa+a+++ ++ +g Bobra.0367s0009.1.p 740 AYKGVSWHKHRRMWQVYIHVPQG--ASRSYHHGYFDDEIEAARAYDREVLRVRG 791 69*******9999*******932..4599999*****99*******98887776 PP | |||||||
4 | AP2 | 22.4 | 3.1e-07 | 1214 | 1259 | 1 | 51 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaark 51 s ++GV+w k++++W+AeI + +f + e+Aa++ ++a + Bobra.0367s0009.1.p 1214 SSFRGVTWSKQTHKWRAEIEIdG-----CVQFLGSSANE-EDAARMVDRALL 1259 679***************99944.....89988666666.******999875 PP | |||||||
5 | AP2 | 24.5 | 6.8e-08 | 1347 | 1388 | 1 | 47 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaai 47 s+y+GV+w++k ++W++ ++d k+ lg+f + +Aa+a + Bobra.0367s0009.1.p 1347 SKYRGVSWCEKGKKWRSLLWD------GaKQRFLGHFANEVDAARAFD 1388 89*******************......44**********88***9976 PP | |||||||
6 | AP2 | 40.6 | 6.2e-13 | 1704 | 1753 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s++kGV+w ++++W+A+++ g +k ++g++ ++e+Aa+a++ a ++l+g Bobra.0367s0009.1.p 1704 SRFKGVSWSDSSNKWRAQCWN----G-SKVQYIGYYESEEDAARAYDTAILQLRG 1753 789***************666....4.7*************************98 PP | |||||||
7 | AP2 | 36.6 | 1.1e-11 | 1803 | 1852 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+ykGV+w +++++W+A++++ +k +lg ++ + eAaka+++a +l+g Bobra.0367s0009.1.p 1803 SKYKGVSWSERSHKWRAQLWHD-----NKVRHLGFYDDEVEAAKAYDRAVVELRG 1852 89*****************994.....5999*******99**********99998 PP | |||||||
8 | AP2 | 48.3 | 2.4e-15 | 1909 | 1958 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GVrw++++ +W+A+I d +k++slg+++t+e Aaka++ +++l+g Bobra.0367s0009.1.p 1909 SPYRGVRWHERNTKWEARIFDG-----QKQISLGYYDTEEAAAKAYDVRALRLRG 1958 68****************9994.....6***********************9998 PP | |||||||
9 | AP2 | 23.3 | 1.6e-07 | 2049 | 2098 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++d + +W A+ + + g +lg f+++ eAa+a+++ + +++g Bobra.0367s0009.1.p 2049 SLYRGVSYDTGTCKWWAH---FAN-G-AHIRQLGAFDSEVEAAQAHDQEAIRMHG 2098 57****************...843.2.48889******99*************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 2133 aa Download sequence |
MSGIESAPSE DGYQQFQSDA QVNAMETLGA DVGASVKVPV PAPTTPVQPG ALPDMGTQVL 60 VSPGLPSTPL PGGPPLPKWP VALSETPETL KEPGMSKTLQ LQYDSPSFVN LPGNAPAPMS 120 STQQQRGSCT PEVAPEGPQV SHSPSSGMEH TESPGNSHRA RPGILWREST RKWEAHGFAN 180 GRLELLGCFD TEEAAQQYAR HALGYAGGGA MISPPKKPIP RLPGGPLLTV SSSGPRKASR 240 KKGPHSHNSS IYRGVSWSTC TGKWRAQIWK GNDVSHLGYF EDEVKAAIAY DEAALANKGP 300 GAITNFCPSS YGYPKPDPTQ SKRKQKSGVK RRSPSSNPPF ASESSPAPGA FIGGSSAGHP 360 QKPSEDMELE ILQGQSRGWG ATKSRSHSEE TNPQLAGRLP PTPLGDVTEV SPHVARRKRT 420 CSRKPSLAGL ASHLVHEPAA EEAAEALASM SSGDGETLSP RSSDPEGISG TAGIEEAPIP 480 RLSRLISPFT KRLNSPSSCK ESPAGSSPKT GQEPDALLGG RRRSTRISDA HDAFAASLLT 540 GLACKGDAEP SSRASPAISE GGGSSRKRGS VGRGTASESA AKSSKFKGVS WHKHSQKWYA 600 YIQASGKMRG LGYFDDQEDA ARAYDAEARK VHGAKAVVNF DLEGNRILRE CPSRGRSLPS 660 SAVNSEDMAS ADESNPGDTP RSRHRPTSLP WGPAPSGVPS RMPGSRPNSS GAATSVGSEE 720 DPSAWGTRRP PYKKPAAHSA YKGVSWHKHR RMWQVYIHVP QGASRSYHHG YFDDEIEAAR 780 AYDREVLRVR GPTTPTNFPL SDYINADGTF INPAHASSSG KGEARSRPGS SGKAASPPPP 840 RGAKGASRRQ HADSHFEPIE KPDALYMLMN AAMSLDAPAR ESDEESWREE PPLKKRWRRS 900 GTPRPPAPDQ RGRVLGSSQD AGLIHRSASP HSIGPCSATR SSTPPPSQQN RLGSSGQILW 960 SPTGAAVTPL IAQAVDLFTS NSPKPVPHTP ATAVEIPPRR HPPIKPPPLA EDAHSKGSFP 1020 EFAALMHAAK VFPLSVDERQ PMELDQQGSQ GGDPMGADGT MAVQQPRDND AAAALAPTPR 1080 NDGAEDPGST EGPQEKETEH MDVDPQVQNS TAGLTQSGRG HTDVPEIEVS LPGQAKISSY 1140 YRSVGSPAWK WDTQGPGRAA ARTDAGSHPR SIRRGSPSWT VSRGLGAVSE ASPLGTQSHP 1200 EGESCETGEG KRVSSFRGVT WSKQTHKWRA EIEIDGCVQF LGSSANEEDA ARMVDRALLQ 1260 HPAYPGRLNH PPAEFQMPLW MKLGTGLSPD DTRVQGAGEA LGGPPNVKVE PSSGLKDPMD 1320 INEGTPKAST PKSGKQPRSP HSPRGTSKYR GVSWCEKGKK WRSLLWDGAK QRFLGHFANE 1380 VDAARAFDRN SIMLKGKDAA KLNFPISDYN LEELAAQFAS APQGPPEAFH PSAEISQSQS 1440 KQTSASNKQP PVEGPREPQD VATQGTEQER TAQAPKAQAP VFREQLMTPV VPPASPANPF 1500 GEQLRREQMH GESPGVPGVG GTLLLANTLL SRLDNASRAS PLINPATCIP SPQEIETPVQ 1560 RPRHFAAGGD GLEAQGSLTP LGDPNREPQL YCMTPEAQGP PDAGTWRPSR SCSEASPHEE 1620 PGALKEAPDA EPSQATLAQV MPSPLEAPQG LVHGSSAPHL GPSLGRQAPK QVGKRSRTPD 1680 PSSTVHGPEG RDRVWWPGPG KRSSRFKGVS WSDSSNKWRA QCWNGSKVQY IGYYESEEDA 1740 ARAYDTAILQ LRGPLMQTNF PATNYESRTN ADGQGEGEVE NPQGHIGGTG SPGGRSGIQR 1800 GTSKYKGVSW SERSHKWRAQ LWHDNKVRHL GFYDDEVEAA KAYDRAVVEL RGTSAQTNFP 1860 IAGAGGARPL ISHATVTPSQ SAGGTPVPTT EGPISPPRVR GSPNAKGSSP YRGVRWHERN 1920 TKWEARIFDG QKQISLGYYD TEEAAAKAYD VRALRLRGPN TQVNFPQSPV AEPAPPHMHG 1980 SDGPGDSARR RRSLSFTPDS PVHTPPGPGV LGPADSTSPS GWGVRKPRSG VPGLPPRSPI 2040 DSSRAPRVSL YRGVSYDTGT CKWWAHFANG AHIRQLGAFD SEVEAAQAHD QEAIRMHGSR 2100 AVTNFPHPEV QAIKQPLFGS PVPHSGAPPA GQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51190.1 | 4e-21 | AP2 family protein |