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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.0010s0006.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | AP2 | ||||||||
Protein Properties | Length: 200aa MW: 22140.9 Da PI: 6.507 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 23 | 2e-07 | 19 | 54 | 10 | 50 |
AP2 10 kkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaar 50 k ++rW A I++ + kr +g+f ++eeAa+ +++++ Bobra.0010s0006.1.p 19 KANKRWKALIKV------NgKRKEVGSFNSEEEAARCYDRFA 54 6789********......44********************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MEQQVCHDNG FSRFTGLAKA NKRWKALIKV NGKRKEVGSF NSEEEAARCY DRFAVLAWGV 60 RAKTNFNMLS LLCDVGKEAR LVLETAMEGS KAKQNRCHGA ARSFMDKWYE GMAHTTHVNN 120 REDAGPSFST EQDQRHRDRG CDGLGMLPPL QHTDGPLADD EVEKAGLLLS LLADGIQEPT 180 YALDDTYTFS PARCSLPEG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 3e-07 | ERF family protein |