![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PKA66929.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 464aa MW: 51179.8 Da PI: 6.4568 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.6 | 5.7e-17 | 154 | 203 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PKA66929.1 154 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 203 78*******************......55************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 464 aa Download sequence |
MLDFNLLSSD ESSPTPEKPL PEGSGGGRMD DSGTSKSSVL NADESSLVCD ENSSTLPAFR 60 FDVLKDGAEG EEEVDMERDD NGEAPETCFV TLELFPPAHP TVTVKPSSSS RPVYLDFGFC 120 QADSPDITEF RFLHPQPQQP VVKKNRRGPR SRSSQYRGVT FYRRTGRWES HIWDCGKQVY 180 LGGFDTAHAA ARAYDRAAIK FRGVEADINF NAVDYEEDLK QMKNLTKEEV VQLLRRESNG 240 FSRGGSNYKG ATLHKCGQWE TRMGQLFGKK YKAYDKAVIK GYAMEAVANF EPSVYEGNLP 300 SPASGLGNNP SICEIDLGLR ISQPSDHGQK RIDNPRGIQF HYGSYGAFDV QKLENDHRSS 360 IPIIQNHPLV AACDRSQAWN NAFQGPFTTS EGQTMNSKAR AGPPAPPSWS WQIDHTPTAQ 420 PFSYAAASSG FSTATVTATP PPLVGSHHHP LLPMPSSHHQ FIRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G28550.1 | 2e-80 | AP2 family protein |