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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA66627.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | AP2 | ||||||||
Protein Properties | Length: 412aa MW: 45008.9 Da PI: 5.6863 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 31.5 | 4.4e-10 | 226 | 285 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpse..ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ k++g+++A+++d ++ g ++ k+ g+++++e+Aa+a++ a +k++g PKA66627.1 226 SCYHGVTKLKWSGKYEAHLWDNTSrvEGsrRKgKHGIFGSYDSEEKAARAHDLAVLKYWG 285 79*******************65558667633688888********************98 PP | |||||||
2 | AP2 | 51 | 3.7e-16 | 330 | 383 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.kr..krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++k +g+W A+I + g r k ++lg+f t+eeAa+a++ a+ +l+g PKA66627.1 330 SSYRGVTRRK-DGKWQARIGRV---GeSRdvKDIYLGTFETEEEAAEAYDIAAIELRG 383 67*****999.9*******998...553458*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 412 aa Download sequence |
MRKLRDSLDT PDSGDHFENR KLRLPSLNDQ AAGGCQKGAA YIQGFGCVEG ETSLLHTAGV 60 SSAFDPVNWA KLDSIEPETT GGDHLPTALG YGTTALVASG KRETLEGDNG LPDGLNDISS 120 LMGARKVVDA PQDYGGLPEK TVYGQRFTGQ EASEDSVMKA EADSFEGPSG ANQESRFTER 180 SAGYETCSME DTANGSVPLE VAKCGEKRVG GLLAAAMKKY TVPRSSCYHG VTKLKWSGKY 240 EAHLWDNTSR VEGSRRKGKH GIFGSYDSEE KAARAHDLAV LKYWGPSQIS KLNFPVSEYE 300 HELETMKTMT QDEYVAHVRR QSSCFSRGAS SYRGVTRRKD GKWQARIGRV GESRDVKDIY 360 LGTFETEEEA AEAYDIAAIE LRGVHAVTNF DISNYCEGSF KRIEGAPCKL ET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 2e-60 | AP2 family protein |