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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA54243.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | AP2 | ||||||||
Protein Properties | Length: 336aa MW: 37242.6 Da PI: 7.6219 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.3 | 1.4e-16 | 265 | 324 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g PKA54243.1 265 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 324 78*******************988886678446*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
MRKMKSMSSN NWLGFSLSPQ EDQAPQPSPA SLSPPLASSF LLAYPHFAEG DNGGLYSQLS 60 VMPVKSDGSL CAMEAFSKSH HGGSPSLLFF FFFFLDSSFS HFLTCLGAEM VSSSSPKLED 120 FLGCGPEMGT HQYCNLEEEG NGTHQSFRQQ SYFQPLQQGI STNLGGYNNM YQGPFFGEHI 180 SDNAFEGLRN VGLGSVGLLR NGDLKHLSLS MSPGTQSGSL SASEQQIISY ASSDLEPSKK 240 RANCKEGEKQ PVHRKSIDTF GQRTSQYRGV TRHRWTGRYE AHLWDNSCKK EGQTRKGRQV 300 YLGGYDMEEK AARAYDLAAL KYWGPSTHIN FPVRFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-65 | AP2 family protein |