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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA51445.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | AP2 | ||||||||
Protein Properties | Length: 263aa MW: 29394.8 Da PI: 7.9715 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.8 | 5e-17 | 130 | 179 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PKA51445.1 130 SQYRGVTFYRRTGRWESHIWD------SgKQVYLGGFDTAHAAARAYDRAAIKFRG 179 78*******************......44************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 263 aa Download sequence |
MWDLNDTPEN MEPVEVPSGG SDEADDGEGF SQRKDMGFDI EDSGSLAVVM EASEEGEGDS 60 GGGMDRISGV SVRGTPTVVV THKFFPSGEE QQPRANWVGF DFRRSPPADV REGSEQPAKK 120 IRRGPRSRSS QYRGVTFYRR TGRWESHIWD SGKQVYLGGF DTAHAAARAY DRAAIKFRGV 180 NADTNFSLQN YEDDLKQMGS LSKEEFVLVL RRQSTGCPRG SSKFRGVTLH KCGRWEARMG 240 QFLGKKYRLL LVSTFRHGCI LCF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 9e-67 | AP2 family protein |