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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA51017.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 234aa MW: 27001.8 Da PI: 8.2991 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.9 | 1.5e-29 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien++ rqvtfskRrng+lKKA+ELSvLCdaev +i+fs++gklye++s PKA51017.1 10 RIENSTSRQVTFSKRRNGLLKKAFELSVLCDAEVGLIVFSPRGKLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 78.3 | 2e-26 | 87 | 172 | 13 | 98 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + e+++ +++ L k++e L+ ++R+l+GedLes+s++eL++Le+qLe+sl+kiR +Kn ll eq+eel++kek l een L+k++ PKA51017.1 87 NLEQWKLDAEALAKKTEVLEISKRKLMGEDLESCSVEELRKLEDQLEQSLSKIRRRKNSLLSEQVEELKEKEKILLEENSLLQKQY 172 7899*******************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MVRGKTEMRR IENSTSRQVT FSKRRNGLLK KAFELSVLCD AEVGLIVFSP RGKLYEFASS 60 SMQKTIERYK QRAKDMCGNG RATDPLNLEQ WKLDAEALAK KTEVLEISKR KLMGEDLESC 120 SVEELRKLED QLEQSLSKIR RRKNSLLSEQ VEELKEKEKI LLEENSLLQK QYSRLLSSAS 180 CKEAVIPQEE NEHSKEVETE LYIGWPERGR NQQLMNSKGE ESVIDSDVQT RGKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22950.1 | 9e-62 | MIKC_MADS family protein |