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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA50418.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | AP2 | ||||||||
Protein Properties | Length: 642aa MW: 70711.3 Da PI: 6.3995 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.2 | 7.5e-12 | 325 | 381 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +++Aa+a++ a++k++g PKA50418.1 325 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqSRKGRQ-GGYDMEDKAARAYDLAALKYWG 381 78*******************87776664446655.77***99*************98 PP | |||||||
2 | AP2 | 36 | 1.7e-11 | 413 | 458 | 7 | 55 |
AP2 7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 r++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g PKA50418.1 413 RRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 458 8999********988532...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 642 aa Download sequence |
MKPMSGGNGN WLGFSLSSQM SVEAACSAEQ PEHHHRQSHH PVRANASSTV SNGVPAGSFY 60 FSSSHLSNSG ICYGVEGANG VMFSELSVMP LKSDGSLCIM EALNRSQHHQ GMVPCQSPKL 120 EDFLGGGPNM GTHHQYGCNE REAMSLSLDS MYYQHQSHEP EGSSYREQQH SLDLLHQPFR 180 QQNPYFQPLQ EGMCSGLSGH HEMYEAAAAE EEPMADHHGF PSFKSWVNRH YNGTTDSKLM 240 DGDEADQMES GSVGSIGYGD LYSLSLSMSP GSQSSCITAP QQVSTAAGVS DCMTLDTSKK 300 RGAAKGVQKQ PVHRKSIDTF GQRTSQYRGV TRHRWTGRYE AHLWDNSCKK EGQSRKGRQG 360 GYDMEDKAAR AYDLAALKYW GPSTHINFPL ENYQKELEEM NNMTRQEYVA HLRRHHQHGR 420 WQARIGRVAG NKDLYLGTFS TQEEAAEAYD IAAIKFRGAN AVTNFDITRY DVDKIMASNT 480 LLSGELAKKN KVPICGSSNA APSSVQNCSA ELNSTEDGSS GSDWKMVLCQ SPHQNLSMSE 540 APDEKPMLNG ICSMETESLE LDQGNDDSRK HDIRTLFQIS GLGSDADVCS KIYGHAPMAG 600 SSQQIRTLML YNCFCSLLKI TRACQDGGHD HGSLNGFEEQ LC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-111 | AP2 family protein |