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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA49229.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | AP2 | ||||||||
Protein Properties | Length: 349aa MW: 38802.3 Da PI: 5.5605 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.7 | 1.2e-17 | 131 | 180 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta+ Aa+a+++a+ k++g PKA49229.1 131 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAQAAARAYDRAAIKFRG 180 78*******************......55************************997 PP | |||||||
2 | AP2 | 42.7 | 1.4e-13 | 223 | 273 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+ +k grW+A++ + +k+++lg f+t+ eAaka+++a+ k +g PKA49229.1 223 SKFRGVTLHK-CGRWEARLGQF--L-GKKYVYLGLFDTEVEAAKAYDKAAIKCNG 273 79********.7******5553..1.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MWDLNGLPDR EGVPAWPAED CSSGGGEATD NSSSSIIIVE ATDGGNSGGF MGLSIAGTGQ 60 DESYSAESEF VITRQFFPIN ELPPETPPLA AKANWLGWKL PDPTAGAASA KALEASQTIK 120 KSRRGPRSRS SQYRGVTFYR RTGRWESHIW DCGKQVYLGG FDTAQAAARA YDRAAIKFRG 180 VEADINFSLS DYEEDLKQMG NLTKEEFVHV LRRQSTGFPR GSSKFRGVTL HKCGRWEARL 240 GQFLGKKYVY LGLFDTEVEA AKAYDKAAIK CNGKDAVTNF DPKIYEEEIN FSRDDNDHNL 300 ELTLGNFSSK RSNLVQMEEE GPTAMDQRAP MDLEPEWMRN IRPKVLKNP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-104 | AP2 family protein |