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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA49196.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | AP2 | ||||||||
Protein Properties | Length: 345aa MW: 38649.4 Da PI: 9.7356 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 29.9 | 1.3e-09 | 64 | 116 | 8 | 55 |
AP2 8 wdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 +++++g+++A+++d ++n k+ ++++lg +g + Aa+a++ a++k++g PKA49196.1 64 RHRWTGKYEAHLWDkNCWNEsqnKKgRQVYLGAYGDESAAARAYDLAALKYWG 116 7999**********999955656446**********88*************98 PP | |||||||
2 | AP2 | 50.2 | 6.5e-16 | 159 | 210 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +++ +lg+f t eeAa a++ a+ +++g PKA49196.1 159 SKYRGVARHHHNGRWEARIGRvF---G-NRYLYLGTFATQEEAATAYDMAAIEYRG 210 89****99**********99966...3.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 345 aa Download sequence |
MAKKKQSSPI SSSKKVAGCG SDGVVKVKRM RKSVPREAPS RRSSVYRGVT SLSRIWICSV 60 RRHRHRWTGK YEAHLWDKNC WNESQNKKGR QVYLGAYGDE SAAARAYDLA ALKYWGRETV 120 LNFPLSNYQE ELKEMEGQSK EEYIGSLRRK SSGFSRGASK YRGVARHHHN GRWEARIGRV 180 FGNRYLYLGT FATQEEAATA YDMAAIEYRG LNAVTNFDLS RYIKWLRPNK DDAGEEHPSP 240 PVAATETEDE NLFGTKISPC QHAGGAAAAP STALGLLLQS PKLKEMLERS PSAATSAGSP 300 QESDRKTPRR SFPEEVQTYF DCHDDAILAE LSAFQAPIFQ CELGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.1 | 1e-108 | AP2 family protein |