PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.559
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family AP2
Protein Properties Length: 304aa    MW: 34094.2 Da    PI: 5.4352
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.559genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.33e-1695146155
                           AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ +++g
  evm.model.AsparagusV1_08.559  95 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAAHAYDIAAIEYRG 146
                                   89****99**********99966...3.6*************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MATERQQLSR FQLVVLLRGA PGLEELAVYL GAYDEEESAA RAYDLAALKY WGPTTFTNFP  60
VTDYEKELQI MQNVTKEEYL ASLRRKSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVFGNK  120
YLYLGTYSTQ EEAAHAYDIA AIEYRGINAV TNFDLSTYIR WLRPGISNIM NNPQEAQPNT  180
GQLQANIFPS NVDAQISLAN RRAFTVDVQQ LSCKHEFMPY QTTGGNKSSP TALGLLLKSS  240
MFQQLVEKNS IVSNEDVDGE DVKDLRLQLE AGDMYNRIVY EGIVDSNAEV NEQGIWNGAL  300
GIQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.36e-70AP2 family protein