![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | evm.model.AsparagusV1_08.559 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 304aa MW: 34094.2 Da PI: 5.4352 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.3 | 3e-16 | 95 | 146 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g evm.model.AsparagusV1_08.559 95 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAAHAYDIAAIEYRG 146 89****99**********99966...3.6*************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 304 aa Download sequence |
MATERQQLSR FQLVVLLRGA PGLEELAVYL GAYDEEESAA RAYDLAALKY WGPTTFTNFP 60 VTDYEKELQI MQNVTKEEYL ASLRRKSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVFGNK 120 YLYLGTYSTQ EEAAHAYDIA AIEYRGINAV TNFDLSTYIR WLRPGISNIM NNPQEAQPNT 180 GQLQANIFPS NVDAQISLAN RRAFTVDVQQ LSCKHEFMPY QTTGGNKSSP TALGLLLKSS 240 MFQQLVEKNS IVSNEDVDGE DVKDLRLQLE AGDMYNRIVY EGIVDSNAEV NEQGIWNGAL 300 GIQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G54320.3 | 6e-70 | AP2 family protein |