PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.362
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family AP2
Protein Properties Length: 471aa    MW: 51905.3 Da    PI: 7.2535
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.362genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.55.9e-17149198155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  evm.model.AsparagusV1_07.362 149 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 198
                                   78*******************......55************************997 PP

2AP242.12.1e-13241291155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   s+y+GV+ +k  grW+A+   +     +k+++lg f+++ eAa+a+++a+ k +g
  evm.model.AsparagusV1_07.362 241 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAAIKCNG 291
                                   89********.7******5553..2.26**********99**********99776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    
MKLEIQARGD QRWGSSLRRE IGDELEIGDE LEDRDRSNAG SEXXXXSGTS NSSVLNAEIS  60
SPAGEEESCS TRTLGLQFGI LRSNRDEEEA EGFVTKELFP AAASSSSSSS SRAAHWADLG  120
LQHVQATGQH VMPQQQVKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD  180
TAHAAARAYD RAAIKFRGVD ADINFNLSDY DEDLKQMRNL TKEEFVHILR RQSTGFSRGS  240
SKYRGVTLHK CGRWEARMGQ FLGKKYIYLG LFDSEIEAAR AYDKAAIKCN GREAVTNFEP  300
SSYEGEMLPE PDSEAIGHDL DLNLRISQPN VSSPKKSDSS MGVQFHFGSL EASDPKKARV  360
ENHPSILGGQ PHSSAMTSEH PQAWSALYPT LYSSREDRAA EKRPIVSSAI PNWTWPLHGS  420
SSTLPLFSSA ASSGFAATTS TTSAATAPPP PPTAHHLQFP PPTTNYYSRN *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.31e-118AP2 family protein