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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_05.2594 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | AP2 | ||||||||
Protein Properties | Length: 209aa MW: 23705.2 Da PI: 10.3072 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.3 | 2.9e-16 | 42 | 102 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkklege 56 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g+ evm.model.AsparagusV1_05.2594 42 SIYRGVTRHRWTGRYEAHLWDkNCWNEsqnKKgRQVYLGAYDDEEAAAHAYDLAALKYWGH 102 57*******************999955656446*************************997 PP | |||||||
2 | AP2 | 34.6 | 4.9e-11 | 144 | 187 | 1 | 47 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaai 47 s+y+GV +++ +grW+A+I + g +k+ +lg++ t + + a++ evm.model.AsparagusV1_05.2594 144 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQKAGRHAYD 187 89****99**********99966...3.6**********555566665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MAKSKGTNNE NSNGDNTVNN NGAKVKRKRK SVPRESPSQR SSIYRGVTRH RWTGRYEAHL 60 WDKNCWNESQ NKKGRQVYLG AYDDEEAAAH AYDLAALKYW GHDTILNFPL STYQEELKEM 120 EGQSKEEYIG SLRRKSSGFS RGVSKYRGVA RHHHNGRWEA RIGRVFGNKY LYLGTYATQK 180 AGRHAYDHGG NRITAASMQS QTSILADT* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.1 | 3e-87 | AP2 family protein |