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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_05.2491 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | AP2 | ||||||||
Protein Properties | Length: 272aa MW: 30256.8 Da PI: 9.9293 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.4 | 1.1e-15 | 116 | 175 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g evm.model.AsparagusV1_05.2491 116 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 175 57*******************666664477446*************************98 PP | |||||||
2 | AP2 | 24.4 | 7.1e-08 | 218 | 252 | 1 | 38 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt 38 s y+GV+++++ grW A+I + +k +lg+f evm.model.AsparagusV1_05.2491 218 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFML 252 57****************988532...5*******976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MDMDTSQNWL AFSLANPNPY LLQHYSSVPH HGAVDASGDG MGPKLEDFLG GGGEPLRYTG 60 GEAEPNGIYG DSDLKSIAAG FLRGSPAAEQ EDDVAKAVVP ATEQRKAVDT FGQRTSIYRG 120 VTRHRWTGRY EAHLWDNSCR REGQSRKGRQ VYLGGYDKEE KAARAYDLAA LKYWGPTTTT 180 NFPVSNYEKE LEEMKNMTRQ EFVASLRRKS SGFSRGASIY RGVTRHHQHG RWQARIGRVA 240 GNKDLYLGTF MLIQTAAAPQ AHKKKRQRPT T* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 263 | 268 | KKKRQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 1e-107 | AP2 family protein |