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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.767 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | AP2 | ||||||||
Protein Properties | Length: 518aa MW: 57672.9 Da PI: 6.9218 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.8 | 4.2e-16 | 233 | 292 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g evm.model.AsparagusV1_03.767 233 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDMAALKYWG 292 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 48.7 | 1.9e-15 | 335 | 386 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I +s +k +lg+f t eeAa+a++ a+ k++g evm.model.AsparagusV1_03.767 335 SIYRGVTRHHQHGRWQARIGRVSG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 386 57****************999754...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 518 aa Download sequence |
MSDNTTNWLG FSLSSHLNME QNQTHPTSSA LSSQPQNSLF LSPHFSNSAL CYGVEAENNG 60 ASFYSNQLSV LPLKSDGSLC FMQEGMVASE SPKLEDFLGC GPNMGTHNYS NSEREAMALS 120 LDSMYYSQET EGEENRGQEL NQFSYMQPLH ELYEAPVGDL KNWAPGFGDL QTLSLSMSPG 180 TQSGYAAAQH QISSVSNNEC MALEPRKKRG AGKGEKKQPV PRKSIDTFGQ RTSQYRGVTR 240 HRWTGRYEAH LWDNSCKKEG QSRKGRQVYL GGYDMEEKAA RAYDMAALKY WGPSTHINFP 300 LDSYRDQIEE MQNMTRQEFV AHLRRKSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVSGNK 360 DLYLGTFSTQ EEAAEAYDIA AIKFRGLSAV TNFDITRYDV DKITNSNTLL PRELARRIKT 420 IEGNNNVTVA QSSCRELQLI SEQNEYQQFS NNLQGFDDSG KMVNHHLSNS SSLVTSLSSS 480 AEASPDRSGL PMILGKPVNS WGPMGQLPVF AAWADIS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-144 | AP2 family protein |