![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | evm.model.AsparagusV1_03.1706 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 176aa MW: 19471.5 Da PI: 4.8706 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 24.1 | 9.1e-08 | 45 | 78 | 20 | 55 |
AP2 20 rdpsengkr....krfslgkfgtaeeAakaaiaarkkleg 55 r+ + ++++lg f+t+ eAa+a+++a+ + +g evm.model.AsparagusV1_03.1706 45 RV------CshqiRYVYLGLFDTETEAARAYDKAAIRCNG 78 33......12236**********99**********98766 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 176 aa Download sequence |
MASSSMQPPT PTPIYSSSAS SSTKNSQQSP VLSRSGWISS GGRVRVCSHQ IRYVYLGLFD 60 TETEAARAYD KAAIRCNGKD AVTNFDPSIY QDELNCDSSN GDQTLELSLG SSGLKRGNMD 120 QIDEESSVRI DQIVPMVFES DWKTSDRNTR IKERGEHIPP EDSFEVARRV KEMYC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G36920.1 | 5e-26 | AP2 family protein |