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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_02.1837 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | AP2 | ||||||||
Protein Properties | Length: 341aa MW: 37799.4 Da PI: 8.243 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 38.2 | 3.5e-12 | 14 | 65 | 9 | 55 |
AP2 9 dkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g evm.model.AsparagusV1_02.1837 14 HRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 65 789**********766644468557*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MKRFFSYALS DEAHRWTGRY EAHLWDKSTW NQNQNKKGKQ VYLGAYDDEE AAARAYDLAA 60 LKYWGAGTLI NFPVSDYTRD LEEMQMISKE DYLVSLRRKS SAFSRGFPKC RGVARQSQGT 120 RWETSFGQMP GCTDAPAGGK YGSVGSFGME RKIDLTNYIR WWQPNKSRQL ESEEDIGKDL 180 RALGCSPIQK TEPYQLPSLG LPNKGKAHAT PSLSACGILS KSVAFKNFVD KSSEIETSTC 240 RNNEMDRGKS AVPLLFAGGS ELDVDRSAGV TSGLCDTTVQ RTPYTFSPIF SEPLSTSWNP 300 VDPVSDPVLW STLVPPTSQS ITATMKKKDI DGAYSYQCQG * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41710.1 | 9e-78 | AP2 family protein |