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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_02.1365 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | AP2 | ||||||||
Protein Properties | Length: 135aa MW: 14397.8 Da PI: 10.0762 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 24.6 | 6.3e-08 | 33 | 65 | 24 | 55 |
AP2 24 e.ngkr.krfslgkfgtaeeAakaaiaarkkleg 55 + ++ + k+++lg f+ta Aa+a+++a+ k++g evm.model.AsparagusV1_02.1365 33 WlRN-CgKQVYLGGFDTAHAAARAYDRAAIKFRG 65 2334.55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MIWRSEQPST RKSHITSQPF AKGLLCSDIP VVWLRNCGKQ VYLGGFDTAH AAARAYDRAA 60 IKFRGVVADS NFNLSARMLL FKIIQAALAA VGAPDNLVHV ITGFAETGQA LVLSVDKIIF 120 VGSPGVGKMV HVTC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.2 | 3e-09 | AP2 family protein |