PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.137
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family AP2
Protein Properties Length: 465aa    MW: 52838.5 Da    PI: 9.6258
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.137genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43.1e-1760109155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  evm.model.AsparagusV1_01.137  60 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 109
                                   78*******************......55************************998 PP

2AP241.33.8e-13152201154
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                                   s+++GV+ +k  grW+A+   +     +k+++lg f+t+ eAa+a+++a+ k  
  evm.model.AsparagusV1_01.137 152 SKFRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKCS 201
                                   79********.7******5553..2.26**********99**********9865 PP

Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    
MGDLVTFQFF PVNGAAEDGI HGGEVTAPRM HWAEVKFVEK AVEVSPAIRK SRRGPRSRSS  60
QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY DRAAIKFRGM EADINFSLSD  120
YDEDMKQMNN LTKEEFVHVL RRQSTGFPRG SSKFRGVTLH KCGRWEARMG QFLGKKYVYL  180
GLFDTEVEAA RAYDKAAIKC SGKYAVTNFD PGMYENESNS IDNITDSQSD HNLELSLGSL  240
SSRRTDLELM DEAYIGVDHQ VPMAYESDWK RNTRPKHKAP TKPWSLPPPP PPLRPRPGMD  300
QRHLAAVPAP PRQIDPARAP AVARVRAASP NLHRTRGDPP GLLLGDYIVN VLCILHLSPI  360
FIHWKYTCIP KELVDHWAHI EALKFRYSIT KAFCIALTLT FFDVFDVPVF WPILVVYFFG  420
IFAITMKGRI RHMMTYKYLP FSTGKQQHYG KKPASTEDET IPMT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.13e-91AP2 family protein