PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_Unassigned.613 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | NAC | ||||||||
Protein Properties | Length: 450aa MW: 50347.9 Da PI: 4.2264 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 164.1 | 5.1e-51 | 6 | 134 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatg 71 lppGfrFhPtd elv++yLk+k+ gk++++ e+i+ev++yk+ PwdL+ k ++++++ ewyfF++rdkky++g evm.model.AsparagusV1_Unassigned.613 6 LPPGFRFHPTDVELVWYYLKRKIMGKPFRF-EAISEVQLYKFAPWDLRdKsCLSSRDLEWYFFCPRDKKYSQG 77 79***************************9.89**************85347777888*************** PP NAM 72 krknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +r+nrat++g+Wkatgkd+++++ ++++vg+kktL+f+ g+ap+g++tdWvm e+rle evm.model.AsparagusV1_Unassigned.613 78 SRTNRATDTGFWKATGKDRTIVH-NSQTVGMKKTLIFHLGKAPHGSRTDWVMYEFRLE 134 ***********************.999****************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 450 aa Download sequence |
MTKTSLPPGF RFHPTDVELV WYYLKRKIMG KPFRFEAISE VQLYKFAPWD LRDKSCLSSR 60 DLEWYFFCPR DKKYSQGSRT NRATDTGFWK ATGKDRTIVH NSQTVGMKKT LIFHLGKAPH 120 GSRTDWVMYE FRLESQELLN AGYAQDAYVL CKIFQKSGPG PKNGEQYGAP FNDDDWDVNI 180 EHPAFFPISP AENAHLFPPV PLQSVASVAC GPSSMLSSFE VGEPSSMLSN FEVGEPSSMV 240 SNFEVGEPSY VPEPYSVEGS LSMQYLAEVG ESSFLPEPSY DDGIFVEQLE AVLSRSPTHS 300 ENAYREMLDS AYLHEYGIPA SGFDFEYLNG DLVDFSDRPF PEPTYGNPLA DVINCEYELH 360 PALAELADEH YMELSDIGFA GNQNPVEFVA PADYNCPFAN DPCSFLDDTY FDSVVDTYMS 420 SEPQISGLSF SEDPVPSSEA QHLPKEGSS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 1e-81 | NAC family protein |