PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_Unassigned.406

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

FAR1

Protein Properties

Length: 357aa MW: 40539.8 Da PI: 9.0652

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_Unassigned.406	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.1	5.9e-18	83	141	29	88
FAR1 29 tkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +rtfvCs+eg+r+++k + ++ +r+r+etr+gC a++++k + +gk++vt++ ++HnH+ evm.model.AsparagusV1_Unassigned.406 83 RSRTFVCSREGFRKDKKGA-KEVKRPRPETRIGCPARMTIKITPSGKYRVTEFIQDHNHQ 141 689**********9999.999**********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MRVGSEWRDE RALVGKVVRC ERDEREGKEV EGGRCRGGMS SLWYQCKLYA TYASWPGGTE 60 NFMQCLWNCM DKGSYATPIL WMRSRTFVCS REGFRKDKKG AKEVKRPRPE TRIGCPARMT 120 IKITPSGKYR VTEFIQDHNH QPAPPSTTHM LRSQRIVTEI QGSEPDLSDD SGTTPKSQNE 180 PSARQVGGLR NVNFLPVDYQ NFLRTKQNPK EHFVRFDSTD CSAICSCKKF EFVGIQCCHV 240 LKVLDFRNIK ELPIRYFLKR WTKEAKVGNE DNRDVANDDL RSPTATSLQV PLPLPCAQQQ 300 GFHGMNQFTQ ESPASDLHQH SFLGTAQLTP GYSTPAMHSQ FLRNSHLSNQ NSGQSH*

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MRVGSEWRDE RALVGKVVRC ERDEREGKEV EGGRCRGGMS SLWYQCKLYA TYASWPGGTE  60
NFMQCLWNCM DKGSYATPIL WMRSRTFVCS REGFRKDKKG AKEVKRPRPE TRIGCPARMT  120
IKITPSGKYR VTEFIQDHNH QPAPPSTTHM LRSQRIVTEI QGSEPDLSDD SGTTPKSQNE  180
PSARQVGGLR NVNFLPVDYQ NFLRTKQNPK EHFVRFDSTD CSAICSCKKF EFVGIQCCHV  240
LKVLDFRNIK ELPIRYFLKR WTKEAKVGNE DNRDVANDDL RSPTATSLQV PLPLPCAQQQ  300
GFHGMNQFTQ ESPASDLHQH SFLGTAQLTP GYSTPAMHSQ FLRNSHLSNQ NSGQSH*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	105	109	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-23	FAR1 family protein