PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.69
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family G2-like
Protein Properties Length: 292aa    MW: 32794.8 Da    PI: 8.6386
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.69genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.62.5e-32126179255
                      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                  pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  evm.model.AsparagusV1_10.69 126 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 179
                                  9****************************************************7 PP
2Myb_DNA-binding49.11.3e-15127178148
                                  TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
              Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                                  r+rWTt ++ ++v+av++lGg+   t+k++ + m  k +tl ++ks++q+y+
  evm.model.AsparagusV1_10.69 127 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 178
                                  89************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MKLFPPHQPV DLSLQISPPN PTNPTDHHDP VDLRFWPNSN RPNSSPNHTP TDPCFFNLLS  60
LSNRYCSYDN HDLGPMTKPI KGIPIYHHAA PHHHRHQAPY HQCEPLGAQR SRLPSRFPAK  120
RSARAPRMRW TTTLHARFVH AVELLGGHER ATPKSVLELM DVKDLTLAHV KSHLQMYRTV  180
KTTDRPPTPS GQSDPTTEMS DDNLLDIRGP EPSVENGKSS GDGHYGVWSN LSSRATWFDD  240
KPIDSSLASL QTFEKGMRSK SVEMISDPNS SCIFETTTKK PNLEFTLGRS H*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.16e-52G2-like family protein