PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.66
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HB-other
Protein Properties Length: 141aa    MW: 16214.3 Da    PI: 6.7918
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.66genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox21.34.7e-0778117443
                                  -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHH CS
                     Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterq 43 
                                  ++++t++q++ Le+ F+ ++++  e++ +L k lgL+ rq
  evm.model.AsparagusV1_10.66  78 KRRLTSTQVQFLEKSFKIKNKLEPERKIQLVKDLGLQPRQ 117
                                  6689*********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MRKSSLNWAS EESKCGPRGF GLLGDLIGPR GVGNIIVSML NFEEICHSTS NQPFYHPREP  60
EETFDDDNDE SLHQPENKRR LTSTQVQFLE KSFKIKNKLE PERKIQLVKD LGLQPRQEGY  120
DNLLKEKEKL KTEIVTWNAK *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.13e-16HD-ZIP family protein