PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.611
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 279aa    MW: 32465.4 Da    PI: 5.6602
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.611genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM179.59e-5681371129
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknrat 78 
                                   +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL++  ++   e++ewyfFs++dkky+tg+r+nrat
  evm.model.AsparagusV1_10.611   8 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLQErcRIGYeEQTEWYFFSHKDKKYPTGTRTNRAT 87 
                                   69****************************.9***************953433332667********************** PP

                           NAM  79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                                    +g+Wkatg+dk+v++ k++l+g++ktLvfykgrap+g+ktdW+mheyrle
  evm.model.AsparagusV1_10.611  88 LAGFWKATGRDKAVHD-KNKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLE 137
                                   ****************.999*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MDSMESCVPP GFRFHPTDEE LVGYYLRKKV ASQKIDLDVI RDIDLYRIEP WDLQERCRIG  60
YEEQTEWYFF SHKDKKYPTG TRTNRATLAG FWKATGRDKA VHDKNKLIGM RKTLVFYKGR  120
APNGQKTDWI MHEYRLESEE DAPPQEEGWV VCRAFKKKAT SQPKPLIVDP WDSPTYIFNQ  180
SSQRFNCSYM QQQFHQPHNN LFLKQENELP QLESPSLLLE EDREQVRVTD WRALDKFVAS  240
QLSHEGSHEI ERVAGFGADS ESDIAAMLSS DGICVFEN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.11e-112NAC family protein