PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_10.449 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | NAC | ||||||||
Protein Properties | Length: 235aa MW: 26795.4 Da PI: 8.4716 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 141.4 | 5.3e-44 | 7 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lppGfrF+Ptdeelvv+yLk+k+++++l++ +i+e+ + +++PwdLp ++ e e yfF ++ +y++g+r+nrat+sg evm.model.AsparagusV1_10.449 7 LPPGFRFRPTDEELVVQYLKRKATSSPLPA-AIIPEIVLGNHDPWDLPGCF---EGEKYFFNLQEARYRNGNRSNRATRSG 83 79****************************.88***************776...4589*********************** PP NAM 82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 yWkatg+++++l++ ++ vg+kk+L+f++ r p g +t+W+mheyrl evm.model.AsparagusV1_10.449 84 YWKATGREQAILCSkRNVIVGMKKVLAFHQVRYPGGARTHWFMHEYRL 131 ***********99846667***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MEKLTRLPPG FRFRPTDEEL VVQYLKRKAT SSPLPAAIIP EIVLGNHDPW DLPGCFEGEK 60 YFFNLQEARY RNGNRSNRAT RSGYWKATGR EQAILCSKRN VIVGMKKVLA FHQVRYPGGA 120 RTHWFMHEYR LVDHEIMAST HIKNPTKSPL FQDHNWVVCH IFVKKKASRI NEDMSQYYDN 180 LQARNNDVVF VEMNHMMGGD SGSQSPTSSC ITDLSDEECS KVEEANSNLI ASSP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 5e-64 | NAC family protein |