PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | evm.model.AsparagusV1_10.298 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 209aa MW: 23995.9 Da PI: 5.3831 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 174 | 4.3e-54 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratk 79 lppGfrFhPtdeelv++yLk+kv+g k+el ++i+evd+yk+ePw+L k + +++ +wyfF +rd+ky++g r+nrat+ evm.model.AsparagusV1_10.298 6 LPPGFRFHPTDEELVNYYLKRKVHGLKIEL-DIIPEVDLYKCEPWELSdKsFLPSKDPDWYFFGPRDRKYPNGFRTNRATQ 85 79****************************.99**************85335556788*********************** PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +gyWk+tgkd++v + +++++g+kktLv+y+grap+g +tdWvmheyr+ evm.model.AsparagusV1_10.298 86 AGYWKSTGKDRRVRC-QNRAIGMKKTLVYYRGRAPRGIRTDWVMHEYRI 133 ***************.8999***************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 209 aa Download sequence |
MAPVGLPPGF RFHPTDEELV NYYLKRKVHG LKIELDIIPE VDLYKCEPWE LSDKSFLPSK 60 DPDWYFFGPR DRKYPNGFRT NRATQAGYWK STGKDRRVRC QNRAIGMKKT LVYYRGRAPR 120 GIRTDWVMHE YRIDDKECED NTMGMQPTTS CSAVDQHETM SPDIVPLRSS PCVDDEEDKG 180 EDDGWMQFIA DYGDDSTPHP SSCVASAN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G17730.1 | 1e-93 | NAC family protein |