PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.1786
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 204aa    MW: 23212.8 Da    PI: 11.1413
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.1786genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.16.7e-057797323
                                   ETTTTEEESSHHHHHHHHHHT CS
                        zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                                   C+ Cg+ F r  nL+ H r H
  evm.model.AsparagusV1_10.1786 77 CEVCGEGFQREQNLQLHRRGH 97
                                   *******************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MAVFGIGGEE IGQMKQQQQH PLNPAMARPL LKPPPRQQLL PSQIELLSLP DRLRLQIRTR  60
SGGAVAKTLM ATNRFLCEVC GEGFQREQNL QLHRRGHNLP WKLKQRNPRD AGRRKVYLCP  120
EPTCVHHDPS RAHRRPDGDQ KHFSRKHGEK KWKCDKCSKK YAVQSDWKPR QDLRHPRSTH  180
CTAATALLQV TYARSGSIGR SVG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02080.15e-45C2H2 family protein