PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.1766
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ARF
Protein Properties Length: 777aa    MW: 87205.9 Da    PI: 5.5852
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.1766genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.11.6e-23127228199
                                    EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT CS
                             B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkang 73 
                                    f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d +  +W++++i+r++++r++lt+GW+ Fv+a++
  evm.model.AsparagusV1_10.1766 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 204
                                    99*****************************8544444..48************************************** PP

                                    --TT-EEEEEE-SSSEE..EEEEE-S CS
                             B3  74 LkegDfvvFkldgrsefelvvkvfrk 99 
                                    L +gD+v+F   ++++ +l+++++r+
  evm.model.AsparagusV1_10.1766 205 LVAGDSVIFI--WNEKNQLLLGIRRA 228
                                    **********..8899999****997 PP
2Auxin_resp117.61.1e-38253336183
                     Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkW 79 
                                    aahaa+t+s F+++YnPra++seFv+++ +++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+ dldpvrWpnS+W
  evm.model.AsparagusV1_10.1766 253 AAHAAATNSRFTIFYNPRACPSEFVIPLTRYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGIGDLDPVRWPNSQW 332
                                    79*********************************9789***************************************** PP

                     Auxin_resp  80 rsLk 83 
                                    rs+k
  evm.model.AsparagusV1_10.1766 333 RSVK 336
                                    *985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 777 aa     Download sequence    
MNSSLSLGEQ DQDDGEKRSL NSELWHACAG PLVCLPTIGT RVVYFPQGHS EQVAASTNKE  60
VEGHIPNYPN LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLSPQEQKDT YVPIEMGVAS  120
KQPMNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DIHDVEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VIFIWNEKNQ LLLGIRRASR PQTIMPSSVL  240
SSDSMHIGLL AAAAHAAATN SRFTIFYNPR ACPSEFVIPL TRYVKAVYHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIG DLDPVRWPNS QWRSVKVGWD ESTAGDRQPR VSLWDIEPLT  360
TFPMYPSLFP LRLKRPWQPG ASFPHVSMQD EGNPFMWLRG DARDQGLHSL NYQSLALQDL  420
RGGDFLKQQL LQYQQSLQFQ QHSGLTSPLF QQQFVQQTDT QQIICPQSQS IVENHNVLNQ  480
QLQQPHDEQR KQQVQEIQDY AQMLSFQNNY LQQPKSPVIS QLCQNLVFPG SGANFSSAVP  540
PTGVQSIMND GQPHRVANVS NLSGLGQPMS EQNQQPWETK LTMSPFTGTV LLPSLPEKDG  600
SVEADNGGAE SENHNVFSGN MDSSSLLSNG VHTLSANAFN TNLSPAQYDA PCIQNPLYSY  660
LDESSGFAQN REETDLTTKT FVKVYKSGSV GRSLDISRFS SYEELREELS QMFGIEGQLE  720
DPRRSGWQLV FVDREDDVLL LGDDPWEAFV NNVWYIKILS PEDVKKMGKP SAESFS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein