PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.1304
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family FAR1
Protein Properties Length: 385aa    MW: 42157.9 Da    PI: 7.5009
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.1304genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR137.48.2e-12327374150
                           FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktek 50 
                                    +fYneYA++ GFs+r+++     ++g  t+rtfvC keg r+ +k++ + 
  evm.model.AsparagusV1_10.1304 327 DFYNEYARNEGFSIRREAYAAD-KQGVLTSRTFVCCKEGLRKADKRD-DL 374
                                    6***************987666.8899***************99988.44 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MSIVVVFVVV VLLLIQESSS TMNGMSAYDV LRSHGLPIGL LPKSTRNSPF DPSGSFDFSR  60
LADPCTANFE TVFRYAAAVN GTISYGKIAS LRGVEAQELF LWFPVHEIRV DVPSSGLIHF  120
DVGVIHKQLS LSLFETPQDC VPCHYAGGNG DGDGSKSFHL KIDVWISQFP NSSQTPDPQF  180
SKGPSPLSPS KTGSLLSTPT FLPRRLSPPS NLPHPPLAPP SRWLTHPLST RTSETPPRSR  240
PTSFNAQTLI ASLRRSQPAT ASSVVEPASA LSPLSSASTR SILARLCIFL GIMEEPVEES  300
NDSLERSKED LKPKFFMEFD SEIAAYDFYN EYARNEGFSI RREAYAADKQ GVLTSRTFVC  360
CKEGLRKADK RDDLTRNPRG VCLL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-07FAR1 family protein