PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.1203
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 452aa    MW: 50479.7 Da    PI: 4.3724
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.1203genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.41.7e-5071351129
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknrat 78 
                                    lppGfrFhPtd elv++yLk+k+ gk++++ e+i+ v++yk+ PwdLp k ++++++ ewyfF++rdkky++g+r+nrat
  evm.model.AsparagusV1_10.1203   7 LPPGFRFHPTDVELVWYYLKRKIMGKPFRF-EAISVVELYKFAPWDLPgKsCLRSRDLEWYFFCPRDKKYSQGSRTNRAT 85 
                                    79***************************9.89***************6347777888********************** PP

                            NAM  79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                                    + gyWk+tgkd+++++ ++++vg+kktL+f+ g+ap+g++tdWvm e+rle
  evm.model.AsparagusV1_10.1203  86 DIGYWKTTGKDRSIFH-NSQTVGMKKTLIFHLGKAPHGSRTDWVMYEFRLE 135
                                    ****************.999****************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    
MMAKTSLPPG FRFHPTDVEL VWYYLKRKIM GKPFRFEAIS VVELYKFAPW DLPGKSCLRS  60
RDLEWYFFCP RDKKYSQGSR TNRATDIGYW KTTGKDRSIF HNSQTVGMKK TLIFHLGKAP  120
HGSRTDWVMY EFRLESNELV TAGYTQDAYV LCKIFQKSGP GPRNGEQYGA PFNEEDWEDV  180
TDTEDVGSFP SIFPSENAHL FCSVPQQSAS SEVVWPSSII STFEVGELSH VPEPSGVGES  240
SYMQYNSEVG ESSYVPNPSC DDGILLEQVE AYLNSSPTHS EIAKGEHVLD SGFLLEEFIS  300
EPDTAFQNVY DDLADPPVQS FSETTDGILH SDATGCEYTL HNALAEFVDW QYMEITDLNF  360
TGEGNPAEFV HPGNHRSLLA DYASSYFPGN TCVESVTDTY VESVTGTHMV SESLQTGFCF  420
SDHFLSMSED HDLHEGENGE GKSLHGSTLG S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.16e-83NAC family protein