PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_09.85
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 267aa    MW: 29636.5 Da    PI: 6.5224
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_09.85genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM137.11.1e-42231542128
                          NAM   2 ppGfrFhPtdeelvveyLkkkvegkklel.eevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 
                                  +pGfrF Pt+eelv +yL++k+e+k+ e+ ++vi+ +diy+++Pw+Lp   ++++ +w+fF++r++++ +g r++r+t +gy
  evm.model.AsparagusV1_09.85  23 APGFRFFPTEEELVGFYLRNKLEKKREEAmARVIPVLDIYNFDPWQLPGGGNEDRGQWFFFCPRQEREIHGGRPRRTTPTGY 104
                                  59***********************96551567***************66556666************************** PP

                          NAM  83 Wkatgkdkevlskkgel....vglkktLvfykgrapkgektdWvmheyrl 128
                                  Wkatg+   v+++++++    +g kkt+vfy+grap g+kt+W m+eyr+
  evm.model.AsparagusV1_09.85 105 WKATGSPSWVYNSSNREacrvIGAKKTMVFYTGRAPGGRKTKWKMNEYRA 154
                                  ***********9844334566***************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MSSSSAKNSN ANDDDDVDDR HRAPGFRFFP TEEELVGFYL RNKLEKKREE AMARVIPVLD  60
IYNFDPWQLP GGGNEDRGQW FFFCPRQERE IHGGRPRRTT PTGYWKATGS PSWVYNSSNR  120
EACRVIGAKK TMVFYTGRAP GGRKTKWKMN EYRALQQDVA SLASGAPKLH SEFSLCRVYL  180
GTLRSFDRRP PVTTEAASSS TVTPPPAEGR SSNDGSHSGS STVTPPPAEG RSSNDGSHSG  240
NDAIHRSEEE AEGGEIDWDS LLQDWD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.17e-67NAC family protein