PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_09.775
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GRAS
Protein Properties Length: 470aa    MW: 53409.7 Da    PI: 7.051
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_09.775genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS312.11.2e-95894661374
                          GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaal 81 
                                   l++lLl  A+a+++++++ a   L++l  ++s +gdp+qR+ ayft +Laa+l+   s ly+ + +++t+    ++el a+
  evm.model.AsparagusV1_09.775  89 LIHLLLISATAIDDNNTSSAIDSLTELYRNVSLNGDPIQRVSAYFTDGLAAKLLTRRSPLYSMIVANPTP----EQELLAF 165
                                   689*************************************************************999998....6778888 PP

                          GRAS  82 klfsevsPilkfshltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgsk 155
                                   + ++  sP+++f+h+taNq I ea+++e     + +H+iDfd+s+G+QWp+L+q+L++++  ++p  lRiTg+g+    s 
  evm.model.AsparagusV1_09.775 166 TQLYRNSPYYQFAHFTANQVIIEAFDEEekhnnRSLHVIDFDVSYGFQWPSLIQSLSDKAtsNSPIYLRITGFGQ----SL 242
                                   899999*******************99977776778*********************999855566*********....9* PP

                          GRAS 156 eeleetgerLakfAeel.gvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvksls 235
                                   e l+et+ rL++fA+ + ++ fef+     +l  l  ++++vk++E+l+Vnlv+ l++l+     +++e +++L+ +k l+
  evm.model.AsparagusV1_09.775 243 EVLKETEIRLKNFAKGCnNLFFEFKG----NLRGLGQRNIEVKKDETLVVNLVFYLQSLM-----SSNEVSATLNYIKLLN 314
                                   ***************873699****9....9999*************************9.....23335679******** PP

                          GRAS 236 Pkvvvvveqeadh.nsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegae.rrerhetlek 314
                                   P +vv+ve+e ++ +++ Fl rf+e+l+y++a+fdsl+  lp++s +r ++E+  lgrei+ +v++e++e  + ++e+le+
  evm.model.AsparagusV1_09.775 315 PSLVVLVEKEGSRiSRSFFLSRFMESLHYFAAMFDSLDDCLPADSIDRLSIEKNHLGREIKYIVTNEEREnNNLKNERLET 395
                                   **********9998******************************************************99556799***** PP

                          GRAS 315 WrerleeaGFkpvplsekaakqaklllr........kvk.sdgyrveee..sgslvlgWkdrpLvsvSaWr 374
                                   W++r+e+ GF+ ++ls++  +qaklll+         ++   g+r+ e+     l lgW+dr L+++++Wr
  evm.model.AsparagusV1_09.775 396 WKKRMESNGFEGIKLSSRSISQAKLLLKikshcsnsDFAnAGGFRIFERdeGRGLSLGWQDRHLITATSWR 466
                                   ***************************73332222223333468887653244566**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    
MLTCLLPPPP YSKNKGSERM QEVEIEEDLL TLGLSINGSW RSDSISKKRK IRDEPYACNK  60
FFALLQARDR MLQLDAGSHG LEDGKGLHLI HLLLISATAI DDNNTSSAID SLTELYRNVS  120
LNGDPIQRVS AYFTDGLAAK LLTRRSPLYS MIVANPTPEQ ELLAFTQLYR NSPYYQFAHF  180
TANQVIIEAF DEEEKHNNRS LHVIDFDVSY GFQWPSLIQS LSDKATSNSP IYLRITGFGQ  240
SLEVLKETEI RLKNFAKGCN NLFFEFKGNL RGLGQRNIEV KKDETLVVNL VFYLQSLMSS  300
NEVSATLNYI KLLNPSLVVL VEKEGSRISR SFFLSRFMES LHYFAAMFDS LDDCLPADSI  360
DRLSIEKNHL GREIKYIVTN EERENNNLKN ERLETWKKRM ESNGFEGIKL SSRSISQAKL  420
LLKIKSHCSN SDFANAGGFR IFERDEGRGL SLGWQDRHLI TATSWRCAL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.19e-47GRAS family protein