PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_09.721

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

C2H2

Protein Properties

Length: 360aa MW: 41443.5 Da PI: 7.788

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_09.721	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00074	79	101	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ C+k F++ s++++H H evm.model.AsparagusV1_09.721 79 CSyeGCNKAFPNESQYRKHAHIH 101 77779**************9877 PP
2	zf-C2H2	17.1	1.6e-05	106	130	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ Cgk F ++s LkrH+ +H evm.model.AsparagusV1_09.721 106 YACSfpGCGKKFLDSSKLKRHQVVH 130 789999****************988 PP
3	zf-C2H2	18.7	4.6e-06	136	160	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp Cgk F+ nL+ H++ H evm.model.AsparagusV1_09.721 136 FICPheGCGKAFNLDFNLRAHMKIH 160 78*********************99 PP
4	zf-C2H2	16	3.5e-05	166	190	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp dCgk++++ Lk+Hi++H evm.model.AsparagusV1_09.721 166 HVCPyaDCGKRYTQECKLKSHIKMH 190 79**********************6 PP
5	zf-C2H2	15.7	4.3e-05	230	255	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+Cp Cgk + + + L+ H+++ H evm.model.AsparagusV1_09.721 230 YVCPyeGCGKNYIHEYKLNLHLKNqH 255 99*********************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MDYHSNNGLF VRRSFVRQRN PAVRWVRDWI PQEVAGTGKR VYLLKWVRED MLKVLKEKFK 60 EPEPEEPKPE PTTEILFLCS YEGCNKAFPN ESQYRKHAHI HGERQYACSF PGCGKKFLDS 120 SKLKRHQVVH TGEKNFICPH EGCGKAFNLD FNLRAHMKIH SQEHYHVCPY ADCGKRYTQE 180 CKLKSHIKMH HEKNPAVEVM KHTPPAEKPH NIVKASPSVV YSSPSSDRPY VCPYEGCGKN 240 YIHEYKLNLH LKNQHPGHNT VEEASDQDVY IAKGGVAKSS KRNKPSLQHK MPPAKLAYQK 300 SSPLASASVS VSKQQQWPPS RDIYEEDSEE TEEENENVAG ESWRYREVNG DDEETEDED*

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MDYHSNNGLF VRRSFVRQRN PAVRWVRDWI PQEVAGTGKR VYLLKWVRED MLKVLKEKFK  60
EPEPEEPKPE PTTEILFLCS YEGCNKAFPN ESQYRKHAHI HGERQYACSF PGCGKKFLDS  120
SKLKRHQVVH TGEKNFICPH EGCGKAFNLD FNLRAHMKIH SQEHYHVCPY ADCGKRYTQE  180
CKLKSHIKMH HEKNPAVEVM KHTPPAEKPH NIVKASPSVV YSSPSSDRPY VCPYEGCGKN  240
YIHEYKLNLH LKNQHPGHNT VEEASDQDVY IAKGGVAKSS KRNKPSLQHK MPPAKLAYQK  300
SSPLASASVS VSKQQQWPPS RDIYEEDSEE TEEENENVAG ESWRYREVNG DDEETEDED*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-104	C2H2 family protein