PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_09.559 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | NAC | ||||||||
Protein Properties | Length: 202aa MW: 23074.4 Da PI: 8.617 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 85.5 | 1e-26 | 36 | 159 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekew.yfFskrdkkyatgkrknratksgy 82 pG+rFhP + ++ ++ kv g +l++ + ike+d+y +eP +Lp +++ ++++w yfF+ + +++ r+t +gy evm.model.AsparagusV1_09.559 36 PGLRFHPAGDVVIRHFVSSKVLGAPLPI-NPIKEIDVYLFEPDELPVTISDGNERWmYFFMYMTE-----ENSDRSTPKGY 110 8***************************.88***************9888888999788876544.....56899****** PP NAM 83 Wkatgkdkevlsk.kgelvglkktLvfykg.rapkge.ktdWvmheyrl 128 Wk +d+++++ ++e +glk+t+++y++ p+g+ kt+W+m+e+r+ evm.model.AsparagusV1_09.559 111 WKLDVSDEPIKDPdTKEIIGLKNTFIYYSKeLGPNGRyKTNWTMQEFRA 159 ************967778**********5535677766*********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MDSSPAVPSS SSSPSKLPSP LPPFNEDGTH PCLPWPGLRF HPAGDVVIRH FVSSKVLGAP 60 LPINPIKEID VYLFEPDELP VTISDGNERW MYFFMYMTEE NSDRSTPKGY WKLDVSDEPI 120 KDPDTKEIIG LKNTFIYYSK ELGPNGRYKT NWTMQEFRAT NLENLKDPKM KNWVVCKIQT 180 VIPREYESKV SKRGKRKKSF T* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 3e-24 | NAC family protein |