PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_09.511
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family FAR1
Protein Properties Length: 513aa    MW: 56290.8 Da    PI: 9.9016
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_09.511genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR155.61.7e-1765148190
                          FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                                   kfY++YA++vGF v++++s+ + ++g++   +++C k g++++e k      r+r++  t+C+a+++vk++ dg  +++  
  evm.model.AsparagusV1_09.511  65 KFYKRYARRVGFGVSVRRSSFT-KEGHCLYLELMCCKGGRKRPEPKF-----RKRTSATTNCQARVRVKLWGDGLLHLELA 139
                                   6****************99998.6677****************9988.....99999************************ PP

                          FAR1  82 eleHnHela 90 
                                   +l+HnH+++
  evm.model.AsparagusV1_09.511 140 SLDHNHPVS 148
                                   ******987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    
MDEGTSARPP KNPRRARLAN RDLNSQEADA ELLELDDDDD DGADGGYDGV PEVGMVFKTH  60
QEVSKFYKRY ARRVGFGVSV RRSSFTKEGH CLYLELMCCK GGRKRPEPKF RKRTSATTNC  120
QARVRVKLWG DGLLHLELAS LDHNHPVSPS MARFLNCYKH LTGFAKKKAL REQEENMVAQ  180
SEEPFVLDRW KKDFKRLHVM NRPSEDIIAN NRVDRYDYLS MRCLQLVEVG VLSDKYQLAL  240
KLIREAEKFL LSDTTYDDTR PKIISRINKA NKPDKDGVQG VGKIVDVENG DEGRRRRGRP  300
PQGKESQIPQ GMSKVGNPAY QFHVVPAVPY LQPHAGVQPG NKPVDGTSPN ALPIGSQYGV  360
QMNPQQYIGN QAAMRPSVVY MFPGGYDPQT LGNGSMMPWI YPQMYQAGQQ PKDPTVTTGQ  420
PGRKRKVTRR RKIGQSVESF SEPSLPPAGV MPSGPAQSGP TPTGPAQPGP TSTGPAQPGP  480
MATGSESLAT AAPGPTPSPR AVPPGPVPQT AG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.12e-06FAR1 family protein