PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.808

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

TALE

Protein Properties

Length: 287aa MW: 32156.8 Da PI: 5.1014

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.808	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.4	2.1e-07	159	192	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + evm.model.AsparagusV1_08.808 159 KWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 192 569*****************************87 PP
2	ELK	29.5	1.7e-10	113	134	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ evm.model.AsparagusV1_08.808 113 ELKHELKQGYKEKIVDIREEIL 134 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MYAHHHNRCF GLSYVTHYVL LLCSFKEQLQ QHVRVHAMEA VMACWELEQS LQSLTGVAPG 60 EGTGATMSDD EDDQEDSGTN FYDASMDGTD TMGFGPLVPT ETERSLMERV RQELKHELKQ 120 GYKEKIVDIR EEILRKRRAG KLPGDTTSLL KAWWQAHAKW PYPTEDDKAR LVQETGLQLK 180 QINNWFINQR KRNWHSNPSS SGVIKSKRKS DDSKAPTPLD RKASKPDDGE QCGDQCNQNA 240 YSCYNSCDRL DDDCSDACDD ALNDCLDKCP PALPSGAVAN VAEPGQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-127	TALE family protein