PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.541 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | WRKY | ||||||||
Protein Properties | Length: 170aa MW: 19282.6 Da PI: 9.4851 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96 | 2.5e-30 | 100 | 158 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+vk+s++pr+YYrC+++gC+vkk+ver+ ed ++v++tYeg H h+ evm.model.AsparagusV1_08.541 100 LDDGYKWRKYGKKKVKNSPNPRNYYRCSTEGCQVKKRVERQLEDASYVITTYEGIHSHD 158 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MFPYASSQSS NSLENNKSAE MLFELSDYLN FSAIELQEQC LSPTSEHLQN HFLLQEDGDQ 60 VNEKNIGSCS KKVGRKLAKS ASKKSSIKVA FKTKSELEIL DDGYKWRKYG KKKVKNSPNP 120 RNYYRCSTEG CQVKKRVERQ LEDASYVITT YEGIHSHDVP SATKSRRNT* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 2e-22 | WRKY family protein |