PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.412 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | Dof | ||||||||
Protein Properties | Length: 262aa MW: 27865.2 Da PI: 9.2266 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 126.3 | 9.2e-40 | 46 | 106 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ke+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknkk+s evm.model.AsparagusV1_08.412 46 KEQALPCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKHS 106 57899*****************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MDTAQWAQGL GMSTVNTTFN TTTAAAAAAA AXXXXQIGEK RARPVKEQAL PCPRCNSTNT 60 KFCYYNNYSL TQPRYFCKTC RRYWTEGGSL RNVPVGGGSR KNKKHSTSTS TSTSNPATKI 120 NHNINLQPPP LLPMSSAMMK PYDEIINGGG FSAMDLLRST GITARGLNPL VHMPMAPESG 180 AIYGSGFGLN EFKFSLDGNG NCNGMQGGGG GGRLLFPFED LKPVSIKSSN EDANDQENRI 240 QGGDPSLFWS GANLGGNGGS W* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61850.2 | 8e-41 | Dof family protein |