PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.404 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | HSF | ||||||||
Protein Properties | Length: 137aa MW: 15664.3 Da PI: 9.5499 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 115.8 | 2.7e-36 | 20 | 111 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEE CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFk 82 Fl+k+y++++d++++++isw+++g++f+v+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+k+ ++ weF+ evm.model.AsparagusV1_08.404 20 FLSKTYQLVDDPSVDDVISWNDDGSAFIVWKPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFS 91 9*****************************************************************99.........**** PP ESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 83 hksFkkgkkellekikrkks 102 ++sF++g+k+ll++ +r+k evm.model.AsparagusV1_08.404 92 NESFRRGEKRLLCRYQRRKI 111 *****************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
MAPAVEQXXX XXXRSLPTPF LSKTYQLVDD PSVDDVISWN DDGSAFIVWK PAEFARDLLP 60 KYFKHNNFSS FVRQLNTYGF RKIVPDRWEF SNESFRRGEK RLLCRYQRRK ISTATPAAVV 120 FQPLRSIDGC GGGDTL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62020.1 | 6e-57 | HSF family protein |