PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.3541

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 343aa MW: 38562.9 Da PI: 4.5102

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.3541	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91.5	6.4e-29	260	317	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgy+W KYGqK++k+ ++prsYYrC++++C++kk+ve+s++dp++++itYeg H h+ evm.model.AsparagusV1_08.3541 260 DDGYRWWKYGQKSIKERPNPRSYYRCAQPRCHAKKQVEKSTKDPEALIITYEGIHSHH 317 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MPWLLCEDAG RFNRAVEASP VCHVAARGSM FEKFERAGIW AASWRENFEA DPTTRIHLTF 60 DLIIISAFME KVDGVGANAD WLNESCEELI RELLENNSPS TTEVEIDADR LNESCAELMK 120 ELLDNDSPLA EEVETDADWL DESCEELIRE LLDDDSTFVV SNPVTDNGIT NVHAATAKNL 180 HSSAYTGPTI SDIENALAAT FQRNQSNTAS LAEKVMQRIE ENTETAKDCD RCRASLFEKI 240 MQKIEQNTVT ANNCEKGVPD DGYRWWKYGQ KSIKERPNPR SYYRCAQPRC HAKKQVEKST 300 KDPEALIITY EGIHSHHAQS SFIPPTSIVG EGQAKEAFRR CY*

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MPWLLCEDAG RFNRAVEASP VCHVAARGSM FEKFERAGIW AASWRENFEA DPTTRIHLTF  60
DLIIISAFME KVDGVGANAD WLNESCEELI RELLENNSPS TTEVEIDADR LNESCAELMK  120
ELLDNDSPLA EEVETDADWL DESCEELIRE LLDDDSTFVV SNPVTDNGIT NVHAATAKNL  180
HSSAYTGPTI SDIENALAAT FQRNQSNTAS LAEKVMQRIE ENTETAKDCD RCRASLFEKI  240
MQKIEQNTVT ANNCEKGVPD DGYRWWKYGQ KSIKERPNPR SYYRCAQPRC HAKKQVEKST  300
KDPEALIITY EGIHSHHAQS SFIPPTSIVG EGQAKEAFRR CY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43290.1	2e-31	WRKY family protein