PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.3277 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB | ||||||||
Protein Properties | Length: 262aa MW: 30571.7 Da PI: 9.2655 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.6 | 5.9e-18 | 30 | 77 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+g+W+t++ + g+ R+ k+c++rw +yl evm.model.AsparagusV1_08.3277 30 KGPWTPEEDIILVSYIQEHGPGNWRTVPTKTGLMRCNKSCRLRWTNYL 77 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.6 | 7.8e-15 | 83 | 128 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E+ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l evm.model.AsparagusV1_08.3277 83 RGNFTPHEEGMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 128 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MKHQEYQRKK KAKKKKMGRS PCCEKIGMKK GPWTPEEDII LVSYIQEHGP GNWRTVPTKT 60 GLMRCNKSCR LRWTNYLRPG IKRGNFTPHE EGMIIHLQAL LGNRWAAIAS YLPQRTDNDI 120 KNYWNTHLKK KLKKYETEIY RDHTTEPGIP ETTNMQSTLS RFTHNSSVYA SSTENISRLL 180 EKWTKTTTVK KEYQQQKQQS LVFDNSVNNC NNKEELESLL SFEAKQRSED HQEPMSLLEE 240 WLLDESTEQV EGLMEISDGV F* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 7 | 14 | QRKKKAKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08810.1 | 1e-91 | MYB family protein |