PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.299 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 172aa MW: 18705.5 Da PI: 10.0086 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13 | 0.00019 | 151 | 171 | 4 | 24 |
HHHHHHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLr 24 hn E rRRdriN+++ L+ evm.model.AsparagusV1_08.299 151 VHNLSEWRRRDRINEKMRALQ 171 6***************98885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MPPPKSQTTH LGNFSHFSRP IRGDVGESSS IKTVGSSTCG SNQVPNQGDV SNNLSRCVFE 60 KGSKGKGPMI SVQGVHANTF DTTMTSSSGG PGCSFGRTTG KQSMSNQNNK RKGRDAEESE 120 CHSEEAEYES IEAKKHTQQS TSTRKSRAAE VHNLSEWRRR DRINEKMRAL Q* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20180.1 | 4e-11 | bHLH family protein |