PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.2861

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NF-X1

Protein Properties

Length: 733aa MW: 78549.2 Da PI: 7.8089

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.2861	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	21.2	6.5e-07	84	102	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C+ CHeG+Cp+C+ evm.model.AsparagusV1_08.2861 84 CGIHRCGLACHEGECPKCS 102 ******************6 PP
2	zf-NF-X1	16.5	1.9e-05	181	199	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C lCH G CppC evm.model.AsparagusV1_08.2861 181 CGQHSCPLLCHSGHCPPCL 199 ******************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 733 aa Download sequence
MPFEGEIRKK GGVFSCNSNC GRVLSCGNHH CPENCHPGPC GDCELLPEKI RSCCCGKTKL 60 MEERKSCLDP VPICSNTCEK LLHCGIHRCG LACHEGECPK CSVKVKQKCR CGSSQRTVEC 120 YRSTEEKDSF VCEKTCGRKK NCGRHRCNER CCPLAKSGSM QIDGGWDPHL CAVPCGKKLR 180 CGQHSCPLLC HSGHCPPCLE TIFIDLTCAC GKSSIPPPLP CGTPSPSCPH PCLIPQPCGH 240 SASHTCHFGD CPPCSVPIVK ECIGGHVLLR NIPCGSKDIR CNQLCGKTRQ CGLHACARTC 300 HPPPCDPHMT ADSGSRSSCG QTCGTPRRDC KHTCTASCHP LSPCPDLRCE FPVTIACSCG 360 RITATVPCGV GGSVSGFNVD SVFEASVMQK LPVPLQPVEG NGKKIPLGQR KLTCDEECEK 420 LARKKQLAEA FDISTPNLDS LHFGENSSAT DLLADIFRRE PKWVLAIEER FKYLVLGKGK 480 GTTSTGLKVH VFFPVLKEKR DAIRCIAERW KLSVHAAGWE PKRFLAVHVT PKSKPPARII 540 GSKPGVPVTA LHPPTFDPSI DMDPRLVVAM LDLPREADIS ALVLRFGGEC ELVWLNDKNA 600 LAVFSDPARA ATALRRLDHG SVYQGAVAVL QNSGGSSGGN AWGGGGAREG GATAAVKSHN 660 PWKKIIAQES NPILTSGNRW DVLDSSVSEP MEVRESAAHD GDGGDSKSGV GVSASTLQVP 720 DGEVDDWEEA CE*

Sequence ? help Back to Top

Protein Sequence Length: 733 aa Download sequence

MPFEGEIRKK GGVFSCNSNC GRVLSCGNHH CPENCHPGPC GDCELLPEKI RSCCCGKTKL  60
MEERKSCLDP VPICSNTCEK LLHCGIHRCG LACHEGECPK CSVKVKQKCR CGSSQRTVEC  120
YRSTEEKDSF VCEKTCGRKK NCGRHRCNER CCPLAKSGSM QIDGGWDPHL CAVPCGKKLR  180
CGQHSCPLLC HSGHCPPCLE TIFIDLTCAC GKSSIPPPLP CGTPSPSCPH PCLIPQPCGH  240
SASHTCHFGD CPPCSVPIVK ECIGGHVLLR NIPCGSKDIR CNQLCGKTRQ CGLHACARTC  300
HPPPCDPHMT ADSGSRSSCG QTCGTPRRDC KHTCTASCHP LSPCPDLRCE FPVTIACSCG  360
RITATVPCGV GGSVSGFNVD SVFEASVMQK LPVPLQPVEG NGKKIPLGQR KLTCDEECEK  420
LARKKQLAEA FDISTPNLDS LHFGENSSAT DLLADIFRRE PKWVLAIEER FKYLVLGKGK  480
GTTSTGLKVH VFFPVLKEKR DAIRCIAERW KLSVHAAGWE PKRFLAVHVT PKSKPPARII  540
GSKPGVPVTA LHPPTFDPSI DMDPRLVVAM LDLPREADIS ALVLRFGGEC ELVWLNDKNA  600
LAVFSDPARA ATALRRLDHG SVYQGAVAVL QNSGGSSGGN AWGGGGAREG GATAAVKSHN  660
PWKKIIAQES NPILTSGNRW DVLDSSVSEP MEVRESAAHD GDGGDSKSGV GVSASTLQVP  720
DGEVDDWEEA CE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein