PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.2765 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | C2H2 | ||||||||
Protein Properties | Length: 106aa MW: 12313 Da PI: 8.4751 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.7 | 0.00037 | 29 | 52 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y C++Cg + s ks+ ++H t H evm.model.AsparagusV1_08.2765 29 YYCEYCGICRSKKSLIRSHVLTyH 52 89*****************99988 PP | |||||||
2 | zf-C2H2 | 23.6 | 1.3e-07 | 76 | 98 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+ sF+ + +Lk+H++ H evm.model.AsparagusV1_08.2765 76 YTCKECDASFRKPAYLKQHMQGH 98 9*******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 106 aa Download sequence |
MTSATVMSET DHEMGEEIKK PIFRDIRRYY CEYCGICRSK KSLIRSHVLT YHKDQIKQAE 60 ADDNNSETNK GKKVWYTCKE CDASFRKPAY LKQHMQGHSL EVIGF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-21 | C2H2 family protein |