PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.250

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 391aa MW: 44849.5 Da PI: 7.1648

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.250	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.2	9.1e-55	89	218	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknrat 78 +ppGfrF Ptdeelv++yL+kk+++k+++l +vik+vd+yk+ePwdL++ ++ a e++ew+fFs++dkky+tg+r+nrat evm.model.AsparagusV1_08.250 89 VPPGFRFYPTDEELVDYYLRKKIASKRIDL-NVIKDVDLYKIEPWDLQEycRLGAeEQTEWHFFSHKDKKYPTGTRTNRAT 168 69**************************.99**********954544442556****************** PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 k+g+Wkatg+dk++++ +++lvg++ktLv+y grap+g+ktdW+mheyrle evm.model.AsparagusV1_08.250 169 KTGFWKATGRDKPIYK-RNNLVGMRKTLVYYIGRAPNGQKTDWIMHEYRLE 218 ************.999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MECMILTDER GTRQMMSMGV GVGVGCGPWS GVYSDHYGRK LGADGARRLD CGPWSGVGCT 60 PIIMGANWVL MVRGGLLNLR SNMNTSSHVP PGFRFYPTDE ELVDYYLRKK IASKRIDLNV 120 IKDVDLYKIE PWDLQEYCRL GAEEQTEWHF FSHKDKKYPT GTRTNRATKT GFWKATGRDK 180 PIYKRNNLVG MRKTLVYYIG RAPNGQKTDW IMHEYRLESK ENGTSQEEGW VVCKVFKKRV 240 STVRKENDTE SSHWFDEKFS FIQNLDSPNQ DFYSQNYPFH QLPPLQSSKI PIFSNNAGSS 300 LQIPYLQNQL QMIPNCSNSD NIDRITGEVT DWRILDKFVA SQLSQDDVSK ENNYSNTATE 360 ENFLVSDHKK EAQVECESTS NPNCQVELWM *

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MECMILTDER GTRQMMSMGV GVGVGCGPWS GVYSDHYGRK LGADGARRLD CGPWSGVGCT  60
PIIMGANWVL MVRGGLLNLR SNMNTSSHVP PGFRFYPTDE ELVDYYLRKK IASKRIDLNV  120
IKDVDLYKIE PWDLQEYCRL GAEEQTEWHF FSHKDKKYPT GTRTNRATKT GFWKATGRDK  180
PIYKRNNLVG MRKTLVYYIG RAPNGQKTDW IMHEYRLESK ENGTSQEEGW VVCKVFKKRV  240
STVRKENDTE SSHWFDEKFS FIQNLDSPNQ DFYSQNYPFH QLPPLQSSKI PIFSNNAGSS  300
LQIPYLQNQL QMIPNCSNSD NIDRITGEVT DWRILDKFVA SQLSQDDVSK ENNYSNTATE  360
ENFLVSDHKK EAQVECESTS NPNCQVELWM *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62700.1	1e-106	NAC family protein